KKULHARIA LABComputational Biology & BioinformaticsProf. Mahesh Kulharia
Central University of Himachal Pradesh

Methods & resources

Tools built around
biological questions.

Published methods for studying molecular interfaces, recognising binding sites and estimating affinity.

Interaction database2018

PPInS

A repository of protein–protein interaction interfaces, connecting atomic contacts with structural and evolutionary context.

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Site prediction2022

YAPPIS-Finder

A computational method for predicting protein–protein interaction sites from protein structure.

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Molecular recognition2009

InCa-SiteFinder

A structure-based method to locate potential inositol and carbohydrate binding sites on protein surfaces.

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Binding affinity2008

SIScoreJE

An information theory-based scoring approach for predicting protein–ligand binding energy from molecular structure.

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